FastQCFastQC Report
Tue 9 Sep 2025
Liquid-fraction-after-anammox-biofilm-formation_S117_R2_001.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameLiquid-fraction-after-anammox-biofilm-formation_S117_R2_001.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences120069
Total Bases30.1 Mbp
Sequences flagged as poor quality0
Sequence length248-251
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1730.14408381847104582No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)